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: Universal Protein Resource - TTL Representation

Active as of 2025-03-24

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:NamingSystem ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "UniProt"] ; # 
  fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: NamingSystem UniProt</b></p><a name=\"UniProt\"> </a><a name=\"hcUniProt\"> </a><a name=\"UniProt-en-US\"> </a><h3>Summary</h3><table class=\"grid\"><tr><td>Defining URL</td><td>http://terminology.hl7.org/NamingSystem/UniProt</td></tr><tr><td>Version</td><td>1.0.0</td></tr><tr><td>Name</td><td>UniProt</td></tr><tr><td>Title</td><td>Universal Protein Resource</td></tr><tr><td>Status</td><td>active</td></tr><tr><td>Definition</td><td><div><p>The Universal Protein Resource (UniProt) is a comprehensive resource for protein sequence and annotation data. The UniProt databases are the <a href=\"https://www.uniprot.org/help/uniprotkb\">UniProt Knowledgebase (UniProtKB)</a>, the <a href=\"https://www.uniprot.org/help/uniref[\">UniProt Reference Clusters (UniRef)</a>, and the <a href=\"https://www.uniprot.org/help/uniparc\">UniProt Archive (UniParc)</a>.</p>\n<p>UniProt Technical Information: <a href=\"https://www.uniprot.org/help/technical\">https://www.uniprot.org/help/technical</a>.</p>\n<p>Examples of records from FDA GSRS (Global Substance Registration System) using UniProt <a href=\"https://www.uniprot.org/help/accession_numbers\">Accession number</a> identifiers:</p>\n<ol>\n<li>\n<p>Minor histocompatibility antigen HA-1</p>\n<ul>\n<li>\n<p>GSRS <a href=\"https://gsrs.ncats.nih.gov/ginas/app/ui/substances/826ee7a3-7441-4dd1-9adb-e0ef04caba18\">record</a>  (note UNIPROT accession number is listed under &quot;Codes - Identifiers&quot;)</p>\n</li>\n<li>\n<p>UNIPROT Accession Number identifier: <a href=\"https://www.uniprot.org/uniprotkb/O78181/entry\">O78181</a></p>\n</li>\n</ul>\n</li>\n<li>\n<p>PULMONARY SURFACTANT-ASSOCIATED PROTEIN C (BOS TAURUS)</p>\n<ul>\n<li>\n<p>GSRS <a href=\"https://gsrs.ncats.nih.gov/ginas/app/ui/substances/6ef2d88a-75db-4ab5-9f46-e81f63e99e74\">record</a> (note UNIPROT accession number is listed under &quot;Codes - Identifiers&quot;)</p>\n</li>\n<li>\n<p>UNIPROT Accession Number identifier: <a href=\"https://www.uniprot.org/uniprotkb/P15781/entry\">P15783</a></p>\n</li>\n</ul>\n</li>\n</ol>\n<p>UniProt releases are published every 8 weeks (4 weeks until the last 2019 release, 2019_11), with possible exceptions in January and summer due to reduced staff during holidays.</p>\n<p>The current release number format is YYYY_XX where YYYY is the calendar year and XX a 2-digit number that is incremented for each release of a given year, e.g. 2010_01, 2010_02, etc.</p>\n<p>For more information, see <a href=\"https://www.uniprot.org/help/synchronization\">https://www.uniprot.org/help/synchronization</a></p>\n<p>Other useful links:</p>\n<ol>\n<li>\n<p><a href=\"https://www.uniprot.org/help/api\">API access</a></p>\n</li>\n<li>\n<p><a href=\"https://www.uniprot.org/uniprotkb?query=*\">Proteins (UniProtKB)</a></p>\n</li>\n<li>\n<p><a href=\"https://www.uniprot.org/proteomes?query=*\">Species (Proteomes)</a></p>\n</li>\n<li>\n<p><a href=\"https://www.uniprot.org/uniref?query=*\">Protein clusters (UniRef)</a></p>\n</li>\n<li>\n<p><a href=\"https://www.uniprot.org/uniparc?query=*\">Sequence archive (UniParc)</a></p>\n</li>\n</ol>\n</div></td></tr><tr><td>Publisher</td><td>UniProt Consortium</td></tr><tr><td>Copyright</td><td><div><p>&quot;We have chosen to apply the <a href=\"https://creativecommons.org/licenses/by/4.0/\">Creative Commons Attribution 4.0 International (CC BY 4.0) License</a> to all copyrightable parts of our databases.&quot;</p>\n<p>See <a href=\"https://www.uniprot.org/help/copyright\">https://www.uniprot.org/help/copyright</a> and <a href=\"https://www.uniprot.org/help/license\">https://www.uniprot.org/help/license</a>.</p>\n</div></td></tr></table><h3>Identifiers</h3><table class=\"grid\"><tr><td><b>Type</b></td><td><b>Value</b></td><td><b>Preferred</b></td><td><b>Period</b></td></tr><tr><td>URI</td><td>https://www.uniprot.org</td><td>true</td><td>2025-03-24 --&gt; (ongoing)</td></tr></table></div>"^^rdf:XMLLiteral
  ] ; # 
  fhir:url [ fhir:v "http://terminology.hl7.org/NamingSystem/UniProt"^^xsd:anyURI] ; # 
  fhir:version [ fhir:v "1.0.0"] ; # 
  fhir:name [ fhir:v "UniProt"] ; # 
  fhir:title [ fhir:v "Universal Protein Resource"] ; # 
  fhir:status [ fhir:v "active"] ; # 
  fhir:kind [ fhir:v "identifier"] ; # 
  fhir:date [ fhir:v "2025-03-24T00:00:00-00:00"^^xsd:dateTime] ; # 
  fhir:publisher [ fhir:v "UniProt Consortium"] ; # 
  fhir:contact ( [
fhir:name [ fhir:v "UniProt Consortium" ] ;
    ( fhir:telecom [
fhir:system [ fhir:v "url" ] ;
fhir:value [ fhir:v "https://www.uniprot.org/help/about" ]     ] [
fhir:system [ fhir:v "url" ] ;
fhir:value [ fhir:v "https://www.uniprot.org/contact" ]     ] )
  ] ) ; # 
  fhir:responsible [ fhir:v "UniProt Consortium"] ; # 
  fhir:description [ fhir:v "The Universal Protein Resource (UniProt) is a comprehensive resource for protein sequence and annotation data. The UniProt databases are the [UniProt Knowledgebase (UniProtKB)](https://www.uniprot.org/help/uniprotkb), the [UniProt Reference Clusters (UniRef)](https://www.uniprot.org/help/uniref[), and the [UniProt Archive (UniParc)](https://www.uniprot.org/help/uniparc).\r\n\r\nUniProt Technical Information: [https://www.uniprot.org/help/technical](https://www.uniprot.org/help/technical).\r\n\r\nExamples of records from FDA GSRS (Global Substance Registration System) using UniProt [Accession number](https://www.uniprot.org/help/accession_numbers) identifiers:\r\n\r\n 1. Minor histocompatibility antigen HA-1\r\n\r\n     - GSRS [record](https://gsrs.ncats.nih.gov/ginas/app/ui/substances/826ee7a3-7441-4dd1-9adb-e0ef04caba18)  (note UNIPROT accession number is listed under \"Codes - Identifiers\")\r\n\r\n     - UNIPROT Accession Number identifier: [O78181](https://www.uniprot.org/uniprotkb/O78181/entry)\r\n\r\n 2. PULMONARY SURFACTANT-ASSOCIATED PROTEIN C (BOS TAURUS)\r\n\r\n     - GSRS [record](https://gsrs.ncats.nih.gov/ginas/app/ui/substances/6ef2d88a-75db-4ab5-9f46-e81f63e99e74) (note UNIPROT accession number is listed under \"Codes - Identifiers\")\r\n\r\n     - UNIPROT Accession Number identifier: [P15783](https://www.uniprot.org/uniprotkb/P15781/entry)     \r\n\r\nUniProt releases are published every 8 weeks (4 weeks until the last 2019 release, 2019_11), with possible exceptions in January and summer due to reduced staff during holidays.\r\n\r\nThe current release number format is YYYY_XX where YYYY is the calendar year and XX a 2-digit number that is incremented for each release of a given year, e.g. 2010_01, 2010_02, etc.\r\n\r\nFor more information, see [https://www.uniprot.org/help/synchronization](https://www.uniprot.org/help/synchronization)\r\n\r\nOther useful links:\r\n\r\n   1. [API access](https://www.uniprot.org/help/api)\r\n\r\n   2. [Proteins (UniProtKB)](https://www.uniprot.org/uniprotkb?query=*)\r\n\r\n   3. [Species (Proteomes)](https://www.uniprot.org/proteomes?query=*)\r\n\r\n   4. [Protein clusters (UniRef)](https://www.uniprot.org/uniref?query=*)\r\n\r\n   5. [Sequence archive (UniParc)](https://www.uniprot.org/uniparc?query=*)"] ; # 
  fhir:copyright [ fhir:v "\"We have chosen to apply the [Creative Commons Attribution 4.0 International (CC BY 4.0) License](https://creativecommons.org/licenses/by/4.0/) to all copyrightable parts of our databases.\"\r\n\r\nSee [https://www.uniprot.org/help/copyright](https://www.uniprot.org/help/copyright) and [https://www.uniprot.org/help/license](https://www.uniprot.org/help/license)."] ; # 
  fhir:uniqueId ( [
fhir:type [ fhir:v "uri" ] ;
fhir:value [ fhir:v "https://www.uniprot.org" ] ;
fhir:preferred [ fhir:v true ] ;
fhir:period [
fhir:start [ fhir:v "2025-03-24"^^xsd:date ]     ]
  ] ) . #